Unlocking the Microbiome

Unlocking the Microbiome

End-to-End Metagenomics Solutions
Isolate Sequencing and Analysis
Industry Leading Bioinformatics
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Experience in 20+ sample types

Experience in 20+ sample types

World's largest curated database of microbial genomes

World's largest curated database of microbial genomes

User-friendly, interactive analysis software

User-friendly, interactive analysis software

50+ publications

50+ publications

Advice and Recommendations

METAGENOMICS ANALYSIS EXPERTSYour study deserves the best!

Over the years, CosmosID has supported countless organizations to publish new studies, develop new products & therapeutics as well as help diagnose over 1500 patients using an industry-leading bioinformatics pipeline and high-quality sequencing. Our goal is to provide our clients with affordable solutions, a seamless customer experience and the highest resolution microbiome data!
  • Customers in 25+ countries
  • 4x award-winning bioinformatics pipeline
  • CLIA/GCP/HIPAA Compliance
  • 12+ years experience
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What Our Customers Say

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Sahar El Aidy, PhD – Assistant Professor – University of Groningen

CosmosID has added great value in helping me understand the role that microbiota composition plays in certain disorders and they provide great interactions with customers when further questions on analyses are raised.

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Jennifer Wargo, PhD & Nadim Ajami, PhD – MD Anderson Cancer Center (PRIME TR)

“Aside from the excellent quality of sequencing data CosmosID generates, their project management skills are exceptional. Our group has benefited immensely from CosmosID’s personalized service and flexibility to work under tight timelines – in the past few months, which have brought new challenges to all, CosmosID have helped us regain the pace of our translational microbiome studies. Their user interface for data analysis is also a great tool for teams that need bioinformatics and analytic support.”

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Christopher Belnap, PhD – CEO – Resilient Biotics

“CosmosID offers a suite of sequencing services that we have utilized to generate high quality metagenomic and transcriptomic data for deep microbiome-host analyses. Hitting appropriate sequence depth, data quality, and timely completion of projects are critical factors that we evaluate when working with a sequencing provider. CosmosID has provided exemplary customer service and has worked with us to complete custom sequencing projects in order to generate critical time-sensitive data.”

Need Metagenomics Analysis?

Most scientists working in the microbiome field are in uncharted territory. You’re not alone and we’re here to help! By combining over 12 years of experience, a CLIA/GCP facility and unrivaled bioinformatics, CosmosID supports industry, academia & clinicians with standardized and validated metagenomics analysis so they can unlock the microbiome with confidence!
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BIOINFORMATICS SERVICESStrain-Level Metagenomics

The CosmosID pipeline was developed to address many challenges in modern-day bioinformatics by achieving better taxonomic resolution than traditional kmer and assembly-based approaches, yet maintaining computational efficiency and being able to achieve species, sub-species and strain-level resolution with less sequencing depth.
Multi-kingdom identification for every sample, every time
Precision filtering for confidence thresholds
fastQC results for data quality reporting
Exportable abundance values, charts & visualizations including sunburts, bubble charts & stacked bar graphs
Unlimited comparative analysis software, complete with Heatmaps, 3D PCA, Alpha Diversity plots & Beta Diversity PCoA
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Sequencing Services

At CosmosID, we offer a range of sequencing services that cover a range of metagenomic approaches. Our sequencing services cover a range of different sample types and have been extensively researched.
Amplicon Sequencing
Shallow Shotgun Sequencing
Deep Shotgun Sequencing
Bacterial Isolate Sequencing
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Exceptional Bioinformatics

Through unrivaled sensitivity and precision, the CosmosID metagenomics pipeline is validated to return strain-level resolution of bacteria, viruses, phages, fungi, protists, bacterial MAGs as well as AMR & Virulence genes. The power of the platform has been demonstrated in 3 key community challenges:

1st Place 

Janssen Pharmaceuticals‘ Mosaic – Strain’ Challenge

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1st Place

PrecisionFDA ‘Pathogen Detection’ Challenge

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1st Place

PrecisionFDA ‘Biothreat Challenge’

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ENQUIRE NOWUnlock the Microbiome

From quotes to samples submission forms and a free account on the CosmosID Metagenomics App, we can help! Get in touch today.

Experience in 20+ sample types

Human, Environmental, food & more

Microbial Genomes to Multi-kingdom, strain-level, bioinformatics

Stored on our user-friendly software

Contact Us Now

Contact Us Now

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